USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: H2B1L_HUMAN USC-OGP 2-DE database:  H2B1L_HUMAN H2B1L_HUMAN General information about the entry View entry in simple text format Entry name H2B1L_HUMAN Primary accession number Q99880 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Histone H2B type 1-L; AltName: Full=Histone H2B.c; Short=H2B/c;. Gene name Name=HIST1H2BL Synonyms=H2BFC Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1329: pI=4.39; Mw=16914 Cross-references UniProtKB/Swiss-Prot Q99880; H2B1L_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name H2B1L_HUMAN Primary accession number Q99880 Secondary accession number(s) B2R5A3 Q52LW9 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  March 15, 2017 (version 166) Name and origin of the protein Description RecName: Full=Histone H2B type 1-L; AltName: Full=Histone H2B.c; Short=H2B/c; Gene name Name=HIST1H2BL Synonyms=H2BFC Encoded on Name=HIST1H2BL; Synonyms=H2BFC Keywords Acetylation; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Glycoprotein; Isopeptide bond; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Ubl conjugation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL Z83740; CAB06035.1; -; Genomic_DNA EMBL AF531295; AAN06695.1; -; Genomic_DNA EMBL AK312114; BAG35050.1; -; mRNA EMBL AL009179; CAA15668.1; -; Genomic_DNA EMBL BC093759; -; NOT_ANNOTATED_CDS; mRNA EMBL BC093761; -; NOT_ANNOTATED_CDS; mRNA CCDS CCDS4625.1; -; . RefSeq NP_003510.1; NM_003519.3; . UniGene Hs.137594; -; . ProteinModelPortal Q99880; -; . SMR Q99880; -; . BioGrid 113936; 27; . DIP DIP-38154N; -; . IntAct Q99880; 17; . MINT MINT-3060109; -; . STRING 9606.ENSP00000366618; -; . iPTMnet Q99880; -; . PhosphoSitePlus Q99880; -; . SwissPalm Q99880; -; . BioMuta HIST1H2BL; -; . DMDM 7387743; -; . SWISS-2DPAGE P99060; -; . EPD Q99880; -; . MaxQB Q99880; -; . PaxDb Q99880; -; . PeptideAtlas Q99880; -; . PRIDE Q99880; -; . TopDownProteomics Q99880; -; . DNASU 8340; -; . Ensembl ENST00000377401; ENSP00000366618; ENSG00000185130; . GeneID 8340; -; . KEGG hsa:8340; -; . UCSC uc003njl.4; human; . CTD 8340; -; . GeneCards HIST1H2BL; -; . HGNC HGNC:4748; HIST1H2BL; . HPA HPA042205; -; . HPA HPA043013; -; . HPA HPA048671; -; . MIM 602800; gene; . neXtProt NX_Q99880; -; . OpenTargets ENSG00000185130; -; . PharmGKB PA29123; -; . eggNOG KOG1744; Eukaryota; . eggNOG ENOG4111NV5; LUCA; . GeneTree ENSGT00870000136414; -; . HOGENOM HOG000231213; -; . HOVERGEN HBG007774; -; . InParanoid Q99880; -; . KO K11252; -; . OMA YTSANRR; -; . OrthoDB EOG091G0XGD; -; . PhylomeDB Q99880; -; . TreeFam TF300212; -; . Reactome R-HSA-1221632; Meiotic synapsis; . Reactome R-HSA-171306; Packaging Of Telomere Ends; . Reactome R-HSA-201722; Formation of the beta-catenin:TCF transactivating complex; . Reactome R-HSA-212300; PRC2 methylates histones and DNA; . Reactome R-HSA-2299718; Condensation of Prophase Chromosomes; . Reactome R-HSA-2559580; Oxidative Stress Induced Senescence; . Reactome R-HSA-2559582; Senescence-Associated Secretory Phenotype (SASP); . Reactome R-HSA-2559586; DNA Damage/Telomere Stress Induced Senescence; . Reactome R-HSA-3214815; HDACs deacetylate histones; . Reactome R-HSA-3214847; HATs acetylate histones; . Reactome R-HSA-427359; SIRT1 negatively regulates rRNA Expression; . Reactome R-HSA-427389; ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression; . Reactome R-HSA-427413; NoRC negatively regulates rRNA expression; . Reactome R-HSA-5250924; B-WICH complex positively regulates rRNA expression; . Reactome R-HSA-5334118; DNA methylation; . Reactome R-HSA-5578749; Transcriptional regulation by small RNAs; . Reactome R-HSA-5617472; Activation of anterior HOX genes in hindbrain development during early embryogenesis; . Reactome R-HSA-5625886; Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3; . Reactome R-HSA-5689880; Ub-specific processing proteases; . Reactome R-HSA-5693565; Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks; . Reactome R-HSA-5693571; Nonhomologous End-Joining (NHEJ); . Reactome R-HSA-5693607; Processing of DNA double-strand break ends; . Reactome R-HSA-606279; Deposition of new CENPA-containing nucleosomes at the centromere; . Reactome R-HSA-69473; G2/M DNA damage checkpoint; . Reactome R-HSA-73728; RNA Polymerase I Promoter Opening; . Reactome R-HSA-73777; RNA Polymerase I Chain Elongation; . Reactome R-HSA-8866654; E3 ubiquitin ligases ubiquitinate target proteins; . Reactome R-HSA-912446; Meiotic recombination; . Reactome R-HSA-977225; Amyloid fiber formation; . GeneWiki HIST1H2BL; -; . GenomeRNAi 8340; -; . PRO PR:Q99880; -; . Proteomes UP000005640; Chromosome 6; . Bgee ENSG00000185130; -; . CleanEx HS_HIST1H2BL; -; . Genevisible Q99880; HS; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0000786; C:nucleosome; NAS:UniProtKB; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0003677; F:DNA binding; NAS:UniProtKB; . GO GO:0006334; P:nucleosome assembly; NAS:UniProtKB; . GO GO:0016567; P:protein ubiquitination; TAS:Reactome; . Gene3D 1.10.20.10; -; 1; . InterPro IPR009072; Histone-fold; . InterPro IPR007125; Histone_H2A/H2B/H3; . InterPro IPR000558; Histone_H2B; . PANTHER PTHR23428; PTHR23428; 1; . Pfam PF00125; Histone; 1; . PRINTS PR00621; HISTONEH2B; . SMART SM00427; H2B; 1; . SUPFAM SSF47113; SSF47113; 1; . PROSITE PS00357; HISTONE_H2B; 1; .

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• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
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• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
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